ビフィズス菌由来アロステリックL-乳酸脱水素酵素 |
Allosteric L-lactate dehydrogenase from Bifidobacterium longum |
1LLD, 1LTH |
So Iwata, 1993-1994 |
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白麹菌由来酸性キシラナーゼC |
Acid xylanase C from Aspergillus kawachii |
1BK1 |
Shinya Fushinobu, 1998 |
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基質特異性拡張型βラクタマーゼ Toho-1 |
Extended-spectrum beta-lactamase Toho-1 from Escherichia coli |
1BZA |
Akiko Ibuka, 1999 |
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ラクトバチルス属菌由来非アロステリックL-乳酸脱水素酵素 |
Non-allosteric L-lactate dehydrogenase from Lactobacillus pentosus |
1EZ4 |
Hiroyuki Uchikoba, 2002 |
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高度好熱性古細菌由来ADP依存性グルコキナーゼ |
ADP dependent glucokinase from Thermococcus litoralis |
1GC5 |
Sohei Ito, 2001 |
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基質特異性拡張型βラクタマーゼToho-1の3種の抗生物質とのアシル中間体構造 |
Acyl-intermediate structures of the extended-spectrum beta-lactamase Toho-1 in complex with three antibiotics |
1IYO, 1IYP, 1IYQ |
Tatsuro Shimamura, 2002 |
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コバルト型ニトリルヒドラターゼ |
Cobalt-containing nitrile hydratase from Pseudonocardia thermophila |
1IRE |
Akimasa Miyanaga, 2001 |
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超好熱性古細菌由来4-α-グルカノトランスフェラーゼ (糖質分解酵素ファミリー57) |
Glycoside hydrolase family 57 4-alpha-glucanotransferase from Thermococcus litoralis (glycoside hydrolase family 57) |
1K1W, 1K1X, 1K1Y |
Hiromi Imamura, 2003 |
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難分解性物質加水分解酵素CumD |
Meta-cleavage product hydrolase CumD from Pseudomonas fluorescens IP01 |
1IUN, 1IUO, 1IUP |
Shinya Fushinobu, Takashi Saku, 2002 |
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好熱菌由来βガラクトシダーゼ (糖質分解酵素ファミリー42) |
Glycoside hydrolase family 42 beta-galactosidase from Thermus thermophilus A4 (glycoside hydrolase family 42) |
1KWG, 1KWK |
Masafumi Hidaka, 2002 |
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超好熱性古細菌由来ADP依存性ホスホフルクトキナーゼ |
ADP dependent phosphofructokinase from Thermococcus litoralis |
(preliminary structure) |
Jong-Jin Jeong, 2003- |
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超好熱性古細菌由来ADP依存性グルコキナーゼ (グルコース結合型) |
ADP dependent glucokinase from Pyrococcus furiosus |
1UA4 |
Sohei Ito, 2003 |
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超好熱性古細菌由来ルブレリスリン様金属結合タンパク質 |
Rubrerythrin-like metalloprotein from Sulfolobus tokodaii strain 7 |
1J30 |
Shinya Fushinobu, 2003 |
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キトビオースホスホリラーゼ(糖質分解酵素ファミリー94) |
Glycoside hydrolase family 94 chitobiose phosphorylase from Vibrio proteolyticus (glycoside hydrolase family 94) |
1V7V, 1V7W, 1V7X |
Masafumi Hidaka, 2004 |
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超好熱性古細菌由来フルクトース-1,6-ビスホスファターゼ |
Fructose-1,6-bisphosphatase from Sulfolobus tokodaii strain 7 |
1UMG |
Hiroshi Nishimasu, 2004 |
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脱窒菌由来一酸化窒素還元酵素P450nor(NADHアナログ複合体) |
Nitric oxiide reductase P450nor from Fusarium oxysporum complexed with an NADH analogue |
1XQD, 1ULW (1J3O has been withdrawn) |
Rieko Oshima, 2004 |
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白麹菌由来α-L-アラビノフラノシダーゼB(糖質分解酵素ファミリー54) |
α-L-Arabinofuranosidase B from Aspergillus kawachii (glycoside hydrolase family 54) |
1WD3, 1WD4, 2D43, 2D44 |
Akimasa Miyanaga, 2004 |
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還元末端キシロース特異的エキソ型オリゴキシラナーゼ(糖質分解酵素ファミリー8) |
Reducing end xylose-releasing exo-oligoxylanase from Bacillus halodurans (glycoside hydrolase family 8) |
1WU4, 1WU5, 1WU6, 2DRO, 2DRQ, 2DRR, 2DRS |
Shinya Fushinobu, Masafumi Hidaka, 2005 |
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難分解性物質分解酵素 |
Terminal component of cumene dioxygenase (CumA1A2) from Pseudomonas fluorescens IP01 |
1WQL |
Xuesong Dong, 2005 |
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セロビオースホスホリラーゼ(糖質分解酵素ファミリー94) |
Cellobiose phosphorylase from Cellvibrio gilvus (glycoside hydrolase family 94) |
2CQS, 2CQT |
Masafumi Hidaka, 2006 |
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キシラナーゼB(糖質分解酵素ファミリー10) | Xylanase B from Clostridium stercorarium F9 (glycoside hydrolase family 10) | 2DEP | Shinya Fushinobu, Mamoru Nishimoto, 2007 |
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白色腐朽菌由来菌体内β-グルコシダーゼ BGL1A(糖質分解酵素ファミリー1) | beta-Glucosidase BGL1A from Phanerochaete chrysosporium (glycoside hydrolase family 1) | 2E3Z, 2E40 | Yuri Nijikken, 2007 |
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共同研究で解析されたもの
Collaborations
植物ホルモン・ジベレリンA4と抗体との複合体 |
The liganded anti-gibberellin A4 antibody 4-B8(8)/E9 Fab fragment |
1KFA |
Takashi Murata, Isomaro Yamaguchi, 2002 |
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ダイオキシン類(カルバゾール)化合物分解系加水分解酵素 (CarC) |
Serine hydroase involved in the carbazole degradation (CarC) |
1J1I |
Kenichi Morii, Hiroshi Habe, Hideaki Nojiri, Toshio Omori
2003 |
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未発表のもの
Unpublished
Protein A |
1.8 A, R=21%, Dec 2002 |
Solved by Se-MAD (J3) |
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Protein B |
1.9 A, R=22.0%, Rfree=25.1%, Feb 2004 |
Solved by MR and Se-MAD (TY) |
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Protein C |
2.75 A, Nov 2005 |
Solved by SAD (MH) |
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Protein D |
2.3 A, Mar 2006 |
Solved by Se-MAD (MH) |
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Protein E |
1.65 A, Dec 2006 |
Solved by Se-MAD (TK-RS-JW) |
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現在、構造を解いており、論文準備中/投稿中のもの、現在構造解析が進行中のものが数種類あります。