2005 - 2006 Publications etc.
Denitrification by the mix-culturing of fungi and bacteria with shell
D. Liu, S. Zhang, Y. Zheng, and H. Shoun
Microbiol Res. 161 (2),132-137 (2006)Tuberibacillus calidus gen. nov., sp. nov., isolated from a compost pile and reclassification of Bacillus naganoensis Tomimura et al. 1990 as Pullulanibacillus naganoensis gen. nov., comb. nov. and Bacillus laevolacticus Andersch et al. 1994 as Sporolactobacillus laevolacticus comb. nov.
K. Hatayama, H. Shoun, Y. Ueda, and A. Nakamura
Int. J. Syst. Evol. Microbiol. 56 (11), 2545-2551 (2006)Improving the catalytic efficiency of a meta-cleavage product hydrolase (CumD) from Pseudomonas fluorescens IP01
S.-Y. Jun, S. Fushinobu, H. Nojiri, T. Omori, H. Shoun and T. Wakagi
Biochim. Biophys. Acta - Proteins Proteomics 1764 (7), 1159-1166 (2006)Identification and characterization of an ATP-Dependent hexokinase with broad substrate specificity from the hyperthermophilic archaeon Sulfolobus tokodaii
H. Nishimasu, S. Fushinobu, H. Shoun, and T. Wakagi
J. Bacteriol. 188 (5), 2014-2019 (2006)Crystallization and preliminary X-ray analysis of cytosolic ?-mannosidase from Thermotoga maritima
M. Nakajima, S. Fushinobu, H. Imamura, H. Shoun, and T. Wakagi
Acta Cryst. F62 (2), 104-105 (2006)The family 42 carbohydrate-binding module of family 54 ?-L-arabinofuranosidase specifically binds the arabinofuranose side chain of hemicellulose
A. Miyanaga, T. Koseki, Y. Miwa, Y. Mese, S. Nakamura, A. Kuno, J. Hirabayashi, H. Matsuzawa, T. Wakagi, H. Shoun and S. Fushinobu
Biochem. J. 399 (3), 503-511 (2006)Structural dissection of the reaction mechanism of cellobiose phosphorylase
M. Hidaka, M. Kitaoka, K. Hayashi, T. Wakagi, H. Shoun, and S. Fushinobu
Biochem. J., 398 (1), 37-43 (2006)Mutational analysis of N-glycosylation recognition sites on the biochemical properties of Aspergillus kawachii ?-L-arabinofuranosidase 54
T. Koseki, Y. Miwa, Y. Mese, A. Miyanaga, S. Fushinobu, T. Wakagi, H. Shoun, H. Matsuzawa, and K. Hashizume
Biochim. Biophys. Acta - Gen. Subjects 1760 (9), 1458-1464 (2006)
ミトコンドリア嫌気呼吸とカビの通性嫌気性
祥雲弘文
PNE 蛋白質核酸酵素 51(5), 419-429 (2006)
「微生物による窒素循環と地球環境」
東京大学の生命科学シンポジウム
15 April 2006, 安田講堂「Direct Hydride Transfer from NADH to Cytochrome P450nor」
The 50th Anniversary of Oxygenases: Advances and Reflections 〜「酵素添加酵素」の50年ー展望と回顧ー " Invited Speaker "
10-12 April 2006, Kyoto JAPAN「タンパク質構造解析に関する重要課題（P450を中心に）を説明」
2006年度日本農芸化学会大会シンポジウム「我が国の生物生産研究の課題と研究戦略〜農芸化学と社会貢献〜 共催：（独）科学技術振興機構
28th March 2006, Kyoto JAPAN「シトクロムP450の基礎とその魅力・潜在性に関して」
花王株式会社生物科学研究所
13 Feburary 2006, Tochigi JAPAN
Planifilum fimeticola gen. nov., sp. nov. and Planifilum fulgidum sp. nov., novel members of the family 'Thermoactinomycetaceae' isolated from compost
K. Hatayama, H. Shoun, Y. Ueda, and A. Nakamura
Int J Syst Evol Microbiol. 55 (5), 2101-2104 (2005)Pseudomonas azotifigens sp. nov., a novel nitrogen-fixing bacterium isolated from a compost pile
K. Hatayama, S. Kawai, H. Shoun, Y. Ueda, and A. Nakamura
Int J Syst Evol Microbiol. 55 (4),1539-1544 (2005)A series of crystal structures of a meta-cleavage product hydrolase from Pseudomonas fluorescens IP01 (CumD) complexed with various cleavage products
S. Fushinobu, S.-Y. Jun, M. Hidaka, H. Nojiri, H. Yamane, H. Shoun, T. Omori, and T. Wakagi
Biosci. Biotechnol. Biochem. 69 (3), 491-498 (2005)Structural basis for the specificity of the reducing end xylose-releasing exo-oligoxylanase from Bacillus halodurans C-125
S. Fushinobu, M. Hidaka, Y. Honda, T. Wakagi, H. Shoun, and M. Kitaoka
J. Biol. Chem. 280 (17), 17180-17186 (2005)Expression of acetylcholine (ACh) and ACh-synthesizing activity in Archaea
T. Yamada, T. Fujii, T. Kanai, T. Amo, T. Imanaka, H. Nishimasu, T. Wakagi, H. Shoun, M. Kamekura, Y. Kamagata, T. Kato, and K. Kawashima
Life Sci., 77 (16), 1935-1944 (2005)Crystallization and preliminary X-ray analysis of reducing-end xylose-releasing exo-oligoxylanase from Bacillus halodurans C-125
Y. Honda, S. Fushinobu, M. Hidaka, T. Wakagi, H. Shoun, and M. Kitaoka
Acta Cryst. F61 (3), 291-292 (2005)
Crystal structure of the terminal cumene dioxygenase component of Pseudomonas fluorescens IP01
X. Dong, S. Fushinobu, E. Fukuda, T. Terada, S. Nakamura, K. Shimizu, H. Nojiri, T. Omori, H. Shoun, and T. Wakagi
J. Bacteriol. 187 (7), 2483-2490 (2005)
「Flavohemoglobin and NO-related enzymes in nitrogen cycle」
H. Shoun, pp. 799-807
「Interaction of cytochrome P450foxy with fatty acids」
M. Kobayashi, S. Fushinobu, T. Wakagi, and H. Shoun, pp. 449-451
In Flavins and Flavoproteins 2005 (Proceedings of the 15th International Symposium on Flavins and Flavoproteins; T. Nishino, R. Miura, M. Tanokura and K. Fukui, eds), ARchiTect inc., Tokyo, Japan （2005）低酸素環境下での呼吸と発酵
高谷直樹、祥雲弘文
バイオサイエンスとインダストリー 63(4), 233-236 (2005)Nitric oxide reductase (P450(nor)) from Fusarium oxysporum
A. Daiber, H. Shoun, and V. Ullrich
J. Inorg. Biochem. 99 (1),185-193 (2005)
GH-94加リン酸分解酵素の反応機構と基質認識
日高將文、本多裕司、北岡本光、韮沢悟、林清、若木高善、祥雲弘文、伏信 進矢
（第12回糖質関連酵素化学シンポジウム）
応用糖質科学 52 (2), 191-196 (2005)
Reaction mechanism and substrate recognition of GH-94 phosphorolytic enzymes
M. Hidaka, Y. Honda, M. Kitaoka, S. Nirawasa, K. Hayashi, T. Wakagi, H. Shoun, and S. Fushinobu
(Proceedings of the Symposium on Amylases and Related Enzymes, 2004)
J. Appl. Glycosci. 52 (2), 191-196 (2005) [Japanese]Reclassification of inverting phosphorylases based on structure determination
M. Hidaka, Y. Honda, M. Kitaoka, T. Wakagi, H. Shoun, and S. Fushinobu
Photon Factory Activity Report #22 2004 Part A, Highlights [Biological Science], pp. 43-44 （2004）
「 Involvement of Flavohemoglobin and Nitric oxide in the Nitrogen Respiration by the Bacterium Streptomyces antibioticus 」
15th International Symposium on Flavins and Flavoproteins " Invited Speaker "
17-22 April 2005, Shonan KANAGAWA