Sample output for Clustal

CLUSTAL X (1.8) multiple sequence alignment
　
　
S_tokodaii_SulE      --------------------MKDLKGTKTAENLKQGFIGESMANRRYLYFAKRADEEGYP
SS02642              --------------------MKELKGTKTAENLRHAFCGEAMANRRYLYFAKRADEEGYP
P_furiosus_rbr       ---------------------MVVKRTMTKKFLEEAFAGESMAHMRYLIFAEKAEQEGFP
PAB0598              -----------------MVFLMPVKRAITRKFLEEAFAGESMAHMKYLIFAEKAEQEGFP
D_vulgaris_ngr       MKVRAQVPTVKNATNFNMVADSKTAVGSTLENLKAAIAGETGAHAKYTAFAKAAREQGYE
D_vulgaris_rbr       --------------------MKSLKGSRTEKNILTAFAGESQARNRYNYFGGQAKKDGFV
                                                 * : :  .: **: *. :*  *.  * ::*: 
　
S_tokodaii_SulE      EIAGLLRSIAEGETAHAFGHLDFIRQGGLTDPATDKP---IGTLEQMIESAIAGETYEWT
SS02642              EIAGLLRSIAEGETAHAFGHLDFIRQGGIGDPATDKP---IGTLEQMLESAVAGETYEWT
P_furiosus_rbr       NIAKLFRAIAYAEFVHAKNHFIALGKLG--------------KTPENLQMGIEGETFEVE
PAB0598              NIAKLFRAIAYAEFVHAKNHFIALGKLG--------------KTPENLQAGIEGETYEVE
D_vulgaris_ngr       QIARLFEATAAAELIHIGLEYALVAEMEPGYEKPTVAAPSAYSCDLNLISGANGEIYETS
D_vulgaris_rbr       QISDIFAETADQEREHAKRLFKFLEGGDLEIVAAFPAG-IIADTHANLIASAAGEHHEYT
                     :*: ::   *  *  *       :                       :  .  ** .*  
　
S_tokodaii_SulE      QMYPGFAKVAREEGFPEVAEWFETLARAEKSHAEKFQNVLKQLKGGT-------------
SS02642              QMYPGYAKVAREEGFNEIAEWFETLARAEKSHAEKFTGVLNQLKGGK-------------
P_furiosus_rbr       EMYPVYNKAAEFQGEKEAVRTTHYALEAEKIHAELYRKAKEKAEKGEDIE--IKKVYICP
PAB0598              EMYPVFNKTAEFQGEKDAVRTTHFALEAEKIHAELYKKAKESAEQGKDIE--IKKVYICP
D_vulgaris_ngr       DMYPAFIREAQGEGNSKAVHVFTRAKLAESVHAERYLAAYNDIDAP-DD----DKFHLCP
D_vulgaris_rbr       EMYPSFARIAREEGYEEIARVFASIAVAEEFHEKRFLDFARNIKEGRVFLREQATKWRCR
                     :*** : : *. :*  . ..       **. * : :    .. .                
　
S_tokodaii_SulE      ----------------------------
SS02642              ----------------------------
P_furiosus_rbr       ICGYTAVDE-APEYCPVCGAPKEKFV--
PAB0598              VCGYTAIDE-APERCPVCGAPRD-----
D_vulgaris_ngr       ICGYIHKGE-DFEKCPICFRPKDTFTAY
D_vulgaris_rbr       NCGYVHEGTGAPELCPACA---------